BioSystems Modelling Group

Systems Biology
Signalling and metabolic pathways, gene regulation networks
Epidemic and population models
Modelling and simulation
ODEs and stochastic modelling
Formal methods
Model checking and static analyses

Web page

https://www.di.unipi.it/msvbio/

Members

Projects

PreMed2

Funder: Regione Toscana, Bando Salute, 2020.

(Abstract)

The main purpose of this project is to identify the population of subjects at risk of developing type 2 diabetes based on eating habits (using validated questionnaires), physical activity (using wearable devices) and metabolic profile.

The BioSystems Modeling group is involved in data analysis with the application of systems biology approaches.

Metodi Informatici Integrati per la Biomedica

PRA – Progetti di Ricerca di Ateneo (Institutional Research Grants) - Project no. PRA_2020-2021_26 , 2020.

(Abstract)

This project aims at integrating different computer methodologies that contribute to interdisciplinary research in bioinformatics and, in particular, to its applications in the biomedical field. This in order to experiment the co-existence of algorithmic, modeling, and machine learning methods in the analysis of biomedical data and, at the same time, to refine the synergy of the many research groups that have been active in the Department of Computer Science for decades.

Selected Publications

2020

Bove, Pasquale; Micheli, Alessio; Milazzo, Paolo; Podda, Marco

Prediction of Dynamical Properties of Biochemical Pathways with Graph Neural Networks Proceedings Article

In: Proceedings of the 13th International Joint Conference on Biomedical Engineering Systems and Technologies, SCITEPRESS - Science and Technology Publications, 2020.

Links | BibTeX