Publications

@article{Prezza2020,

title = {Variable-order reference-free variant discovery with the Burrows-Wheeler Transform},

author = {Nicola Prezza and Nadia Pisanti and Marinella Sciortino and Giovanna Rosone},

doi = {10.1186/s12859-020-03586-3},

year  = {2020},

date = {2020-09-01},

journal = {BMC Bioinformatics},

volume = {21},

number = {S8},

publisher = {Springer Science and Business Media LLC},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{Guerrini2020,

title = {Metagenomic analysis through the extended Burrows-Wheeler transform},

author = {Veronica Guerrini and Felipe A Louza and Giovanna Rosone},

doi = {10.1186/s12859-020-03628-w},

year  = {2020},

date = {2020-09-01},

journal = {BMC Bioinformatics},

volume = {21},

number = {S8},

publisher = {Springer Science and Business Media LLC},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{Kocian2020b,

title = {Bayesian Sigmoid-Type Time Series Forecasting with Missing Data for Greenhouse Crops},

author = {Alexander Kocian and Giulia Carmassi and Fatjon Cela and Luca Incrocci and Paolo Milazzo and Stefano Chessa},

doi = {10.3390/s20113246},

year  = {2020},

date = {2020-01-01},

journal = {Sensors},

volume = {20},

number = {11},

pages = {3246},

publisher = {MDPI AG},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{Kocian2020c,

title = {Dynamic Bayesian network for crop growth prediction in greenhouses},

author = {Alexander Kocian and Daniele Massa and Samantha Cannazzaro and Luca Incrocci and Sara Di Lonardo and Paolo Milazzo and Stefano Chessa},

doi = {10.1016/j.compag.2019.105167},

year  = {2020},

date = {2020-01-01},

journal = {Computers and Electronics in Agriculture},

volume = {169},

pages = {105167},

publisher = {Elsevier BV},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{Barbuti2020,

title = {Encoding Boolean networks into reaction systems for investigating causal dependencies in gene regulation},

author = {Roberto Barbuti and Roberta Gori and Paolo Milazzo},

doi = {10.1016/j.tcs.2020.07.031},

year  = {2020},

date = {2020-01-01},

journal = {Theoretical Computer Science},

publisher = {Elsevier BV},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{Ferragina2020,

title = {The PGM-index: a fully-dynamic compressed learned index with provable worst-case bounds},

author = {Paolo Ferragina and Giorgio Vinciguerra},

doi = {10.14778/3389133.3389135},

year  = {2020},

date = {2020-01-01},

journal = {Proceedings of the VLDB Endowment},

volume = {13},

number = {10},

pages = {1162--1175},

publisher = {VLDB Endowment},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{Rossi2020,

title = {A Public Dataset of 24-h Multi-Levels Psycho-Physiological Responses in Young Healthy Adults},

author = {Alessio Rossi and Eleonora Da Pozzo and Dario Menicagli and Chiara Tremolanti and Corrado Priami and Alina Sirbu and David A Clifton and Claudia Martini and Davide Morelli},

doi = {10.3390/data5040091},

year  = {2020},

date = {2020-01-01},

journal = {Data},

volume = {5},

number = {4},

pages = {91},

publisher = {MDPI AG},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{Ferrari2020,

title = {Measuring the effects of confounders in medical supervised classification problems: the Confounding Index (CI)},

author = {Elisa Ferrari and Alessandra Retico and Davide Bacciu},

doi = {10.1016/j.artmed.2020.101804},

year  = {2020},

date = {2020-01-01},

journal = {Artificial Intelligence in Medicine},

volume = {103},

pages = {101804},

publisher = {Elsevier BV},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{Kocian2020,

title = {Monitoring Practitioner's Skills in Pure-Tone Audiometry},

author = {Alexander Kocian and Stefano Chessa and Wilko Grolman},

doi = {10.4018/ijehmc.2020040103},

year  = {2020},

date = {2020-01-01},

journal = {International Journal of E-Health and Medical Communications},

volume = {11},

number = {2},

pages = {38--63},

publisher = {IGI Global},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{Pappalardo2019b,

title = {PlayeRank: Data-driven Performance Evaluation and Player Ranking in Soccer via a Machine Learning Approach},

author = {Luca Pappalardo and Paolo Cintia and Paolo Ferragina and Emanuele Massucco and Dino Pedreschi and Fosca Giannotti},

doi = {10.1145/3343172},

year  = {2019},

date = {2019-11-01},

journal = {ACM Transactions on Intelligent Systems and Technology},

volume = {10},

number = {5},

pages = {1--27},

publisher = {Association for Computing Machinery (ACM)},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{Misselbeck2019,

title = {A network-based approach to identify deregulated pathways and drug effects in metabolic syndrome},

author = {Karla Misselbeck and Silvia Parolo and Francesca Lorenzini and Valeria Savoca and Lorena Leonardelli and Pranami Bora and Melissa J Morine and Maria Caterina Mione and Enrico Domenici and Corrado Priami},

doi = {10.1038/s41467-019-13208-z},

year  = {2019},

date = {2019-11-01},

journal = {Nature Communications},

volume = {10},

number = {1},

publisher = {Springer Science and Business Media LLC},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{Morelli2019,

title = {Analysis of the Impact of Interpolation Methods of Missing RR-intervals Caused by Motion Artifacts on HRV Features Estimations},

author = {Davide Morelli and Alessio Rossi and Massimo Cairo and David A Clifton},

doi = {10.3390/s19143163},

year  = {2019},

date = {2019-07-01},

journal = {Sensors},

volume = {19},

number = {14},

pages = {3163},

publisher = {MDPI AG},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{Ciuffoletti2019,

title = {Design of an Open Remote Electrocardiogram (ECG) Service},

author = {Augusto Ciuffoletti},

doi = {10.3390/fi11040101},

year  = {2019},

date = {2019-01-01},

journal = {Future Internet},

volume = {11},

number = {4},

pages = {101},

publisher = {MDPI AG},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{Rossi2019,

title = {Relationship between External and Internal Workloads in Elite Soccer Players: Comparison between Rate of Perceived Exertion and Training Load},

author = {Alessio Rossi and Enrico Perri and Luca Pappalardo and Paolo Cintia and Fedon Marcello Iaia},

doi = {10.3390/app9235174},

year  = {2019},

date = {2019-01-01},

journal = {Applied Sciences},

volume = {9},

number = {23},

pages = {5174},

publisher = {MDPI AG},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{Pappalardo2019,

title = {A public data set of spatio-temporal match events in soccer competitions},

author = {Luca Pappalardo and Paolo Cintia and Alessio Rossi and Emanuele Massucco and Paolo Ferragina and Dino Pedreschi and Fosca Giannotti},

doi = {10.1038/s41597-019-0247-7},

year  = {2019},

date = {2019-01-01},

journal = {Scientific Data},

volume = {6},

number = {1},

publisher = {Springer Science and Business Media LLC},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{Simoni2019,

title = {A comparison of deterministic and stochastic approaches for sensitivity analysis in computational systems biology},

author = {Giulia Simoni and Hong Thanh Vo and Corrado Priami and Luca Marchetti},

doi = {10.1093/bib/bbz014},

year  = {2019},

date = {2019-01-01},

journal = {Briefings in Bioinformatics},

volume = {21},

number = {2},

pages = {527--540},

publisher = {Oxford University Press (OUP)},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{Podda2018,

title = {A machine learning approach to estimating preterm infants survival: development of the Preterm Infants Survival Assessment (PISA) predictor},

author = {Marco Podda and Davide Bacciu and Alessio Micheli and Roberto Bellu and Giulia Placidi and Luigi Gagliardi},

doi = {10.1038/s41598-018-31920-6},

year  = {2018},

date = {2018-09-01},

journal = {Scientific Reports},

volume = {8},

number = {1},

publisher = {Springer Science and Business Media LLC},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{Bacciu2018,

title = {Randomized neural networks for preference learning with physiological data},

author = {Davide Bacciu and Michele Colombo and Davide Morelli and David Plans},

doi = {10.1016/j.neucom.2017.11.070},

year  = {2018},

date = {2018-07-01},

journal = {Neurocomputing},

volume = {298},

pages = {9--20},

publisher = {Elsevier BV},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{Cappanera2018,

title = {Demand uncertainty in robust Home Care optimization},

author = {Paola Cappanera and Maria Grazia Scutellà and Federico Nervi and Laura Galli},

url = {https://doi.org/10.1016/j.omega.2017.08.012},

doi = {10.1016/j.omega.2017.08.012},

year  = {2018},

date = {2018-01-01},

journal = {Omega},

volume = {80},

pages = {95--110},

publisher = {Elsevier BV},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{Rossi2018,

title = {Effective injury forecasting in soccer with GPS training data and machine learning},

author = {Alessio Rossi and Luca Pappalardo and Paolo Cintia and Fedon Marcello Iaia and Javier Fernandez and Daniel Medina},

editor = {Jaime Sampaio},

doi = {10.1371/journal.pone.0201264},

year  = {2018},

date = {2018-01-01},

journal = {PLOS ONE},

volume = {13},

number = {7},

pages = {e0201264},

publisher = {Public Library of Science (PLoS)},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{Palumbo2017,

title = {Reliability and human factors in Ambient Assisted Living environments},

author = {Filippo Palumbo and Davide La Rosa and Erina Ferro and Davide Bacciu and Claudio Gallicchio and Alessio Micheli and Stefano Chessa and Federico Vozzi and Oberdan Parodi},

doi = {10.1007/s40860-017-0042-1},

year  = {2017},

date = {2017-06-01},

journal = {Journal of Reliable Intelligent Environments},

volume = {3},

number = {3},

pages = {139--157},

publisher = {Springer Science and Business Media LLC},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{PanGenomics2016,

title = {Computational pan-genomics: status, promises and challenges},

author = {The Computational Pan-Genomics Consortium},

doi = {10.1093/bib/bbw089},

year  = {2016},

date = {2016-10-01},

journal = {Briefings in Bioinformatics},

pages = {bbw089},

publisher = {Oxford University Press (OUP)},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{Barbuti2016,

title = {Investigating dynamic causalities in reaction systems},

author = {Roberto Barbuti and Roberta Gori and Francesca Levi and Paolo Milazzo},

doi = {10.1016/j.tcs.2015.11.041},

year  = {2016},

date = {2016-01-01},

journal = {Theoretical Computer Science},

volume = {623},

pages = {114--145},

publisher = {Elsevier BV},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{Sameen2016,

title = {Mathematical modeling of drug resistance due to KRAS mutation in colorectal cancer},

author = {Sheema Sameen and Roberto Barbuti and Paolo Milazzo and Antonio Cerone and Marzia Del Re and Romano Danesi},

doi = {10.1016/j.jtbi.2015.10.019},

year  = {2016},

date = {2016-01-01},

journal = {Journal of Theoretical Biology},

volume = {389},

pages = {263--273},

publisher = {Elsevier BV},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{Yalnda2016,

title = {Pattern-based decompositions for human resource planning in home health care services},

author = {Semih Yalçindağ and Paola Cappanera and Maria Grazia Scutellà and Evren Şahin and Andrea Matta},

url = {https://doi.org/10.1016/j.cor.2016.02.011},

doi = {10.1016/j.cor.2016.02.011},

year  = {2016},

date = {2016-01-01},

journal = {Computers & Operations Research},

volume = {73},

pages = {12--26},

publisher = {Elsevier BV},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{Grossi2016,

title = {Circular sequence comparison: algorithms and applications},

author = {Roberto Grossi and Costas S Iliopoulos and Robert Mercas and Nadia Pisanti and Solon P Pissis and Ahmad Retha and Fatima Vayani},

doi = {10.1186/s13015-016-0076-6},

year  = {2016},

date = {2016-01-01},

journal = {Algorithms for Molecular Biology},

volume = {11},

number = {1},

publisher = {Springer Science and Business Media LLC},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{Patterson2015,

title = {WhatsHap: Weighted Haplotype Assembly for Future-Generation Sequencing Reads},

author = {Murray Patterson and Tobias Marschall and Nadia Pisanti and Leo van Iersel and Leen Stougie and Gunnar W Klau and Alexander Schönhuth},

doi = {10.1089/cmb.2014.0157},

year  = {2015},

date = {2015-06-01},

journal = {Journal of Computational Biology},

volume = {22},

number = {6},

pages = {498--509},

publisher = {Mary Ann Liebert Inc},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{Cappanera2015,

title = {Joint Assignment, Scheduling, and Routing Models to Home Care Optimization: A Pattern-Based Approach},

author = {Paola Cappanera and Maria Grazia Scutellà},

url = {https://doi.org/10.1287/trsc.2014.0548},

doi = {10.1287/trsc.2014.0548},

year  = {2015},

date = {2015-01-01},

journal = {Transportation Science},

volume = {49},

number = {4},

pages = {830--852},

publisher = {Institute for Operations Research and the Management Sciences (INFORMS)},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{Cappanera2013,

title = {Home Care optimization: impact of pattern generation policies on scheduling and routing decisions},

author = {Paola Cappanera and Maria Grazia Scutellà},

url = {https://doi.org/10.1016/j.endm.2013.05.075},

doi = {10.1016/j.endm.2013.05.075},

year  = {2013},

date = {2013-01-01},

journal = {Electronic Notes in Discrete Mathematics},

volume = {41},

pages = {53--60},

publisher = {Elsevier BV},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{Barbuti2012,

title = {Probabilistic model checking of biological systems with uncertain kinetic rates},

author = {Roberto Barbuti and Francesca Levi and Paolo Milazzo and Guido Scatena},

doi = {10.1016/j.tcs.2011.10.022},

year  = {2012},

date = {2012-02-01},

journal = {Theoretical Computer Science},

volume = {419},

pages = {2--16},

publisher = {Elsevier BV},

keywords = {},

pubstate = {published},

tppubtype = {article}

}